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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891184.1_cds_XP_016445913.1_40823
CDS Infomation

[gene=LOC107771104] [db_xref=GeneID:107771104] [protein=laccase-4-like] [protein_id=XP_016445913.1] [location=complement(join(26323..26453,26723..27649,27768..27896,28002..28246,28792..28943,30097..30186))] [gbkey=CDS]
Sequence

ATGAACTCTTGGATTCGTCTTTTCATAGTATTGGCAGCTTGTCTTTTTCCTCTTGTCGTT
GAATGCAGGATTCGACATTACAAGTTCAATGTGGTAATGAAGAACACGACTCGCCTTTGT
TCATCCAAGCCCATTGTTACTGTTAATGGAAAATTTCCAGGACCTACAATCTATGCTCGG
GAAGGTGACACAGTACTTGTCAAAGTTGTTAACCATGTCAAGTATAATCTCTCTATCCAT
TGGCATGGTATTAGACAACTTAGAACAGGTTGGGCAGATGGACCAGCATACATCACACAA
TGTCCAATTCAGCCAGGGCAAAACTATGTGTATAACTTCACTATTACAGGCCAAAGGGGT
ACACTATTTTGGCATGCTCATATTTTGTGGCTAAGGGCCACTGTTCATGGTGCAATTGTT
ATCTTGCCTAACCTTGGAGTGCCTTATCCATTCCCTAAACCCAACCACGAAGCTGTCGTG
ATCCTAGCTGAATGGTGGAAATCTGATACCGAAGCTGTGATTAATGAAGCCATAAAATCA
GGATTAGCCCCTAATGTTTCTGATGCTCACACTATTAATGGTCATCCGGGACCCGTCTCA
AATTGCGCATCACAAGGTGGATACAAATTGAACGTTGATCCAGGAAAAACCTACATGTTA
CGAGTCATCAACGCTGCGCTCAATGAAGAACTCTTTTTCAAAATTGCTGGCCATAAAATG
ACAGTAGTTGAAGTTGATGCCACTTACATTAAACCTTTCAAAACAGACACAATTGTAATT
GCTCCTGGCCAAACAACAAATGTAATTGTCACTGCCAATCAAGGTTCTGGAAAATACATG
GTTGCTGCTTCACCTTTTATGGATGCACCAATTGCTGTTGATAATGTTACAGCAATAGCC
ACTTTACATTATTCTGGCACACAAGGAAATAGCCACATTTCACTTACTAGTACACCACCT
AAAAATGCCACCCCTGTAGCCAACACTTTTCTTGATTCTTTAAGAAGCCTGAATTCCAAA
AAATACCCTGCTAAAGTTCCCAAAAAAATTGATCATTCCCTATTTTTCACGGTAGGTTTA
GGGATTAATCCATGCCCAACTTGCAAACAAGGTAATGGAAGCAGAGTTGTGGCTAGTGTA
AACAATGTTACATTCGTTATGCCAACGGTTGCCCTTTTACAAGCACATTTCTTTGGGACT
AAAGGAGTTTTCACGACAGATTTTCCAGCAAACCCGCCTTTTGCTTTCAACTATACGGGA
ACAGGACCAACTAATTTGGCGACGATGAATGGGACTAAGGTTTATAGGCTGCGGTATAAC
GATACAGTTCAATTGGTTTTGCAGGATACTGGAATTATAGCCCCTGAGAACCATCCAATC
CATTTGCATGGCTTCAATTTTTTTCTAGTGGGTAAAGGCATAGGAAATTTTAATCCAAAA
ACAGATCCTAAGAATTTTAATCTTGTGGATCCTGTTGAGAGGAATACAGTTGGTGTTCCT
GCTGGAGGATGGGTTGCTATAAGATTTCGTGCTGACAATCCAGGAGTTTGGTTTATGCAT
TGTCATCTAGAGATACACACAACATGGGGATTGAAAATGGCATGGCTTGTAGATAATGGC
AAAGGCCCAAATGAGTCCCTTTTGCCACCTCCTAAGGATCTTCCAAAATGCTAA

Peptide Sequence

PEP ID

XP_016445913.1
PEP Infomation

PREDICTED: laccase-4-like [Nicotiana tabacum]
Sequence

MNSWIRLFIVLAACLFPLVVECRIRHYKFNVVMKNTTRLCSSKPIVTVNGKFPGPTIYAR
EGDTVLVKVVNHVKYNLSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYVYNFTITGQRG
TLFWHAHILWLRATVHGAIVILPNLGVPYPFPKPNHEAVVILAEWWKSDTEAVINEAIKS
GLAPNVSDAHTINGHPGPVSNCASQGGYKLNVDPGKTYMLRVINAALNEELFFKIAGHKM
TVVEVDATYIKPFKTDTIVIAPGQTTNVIVTANQGSGKYMVAASPFMDAPIAVDNVTAIA
TLHYSGTQGNSHISLTSTPPKNATPVANTFLDSLRSLNSKKYPAKVPKKIDHSLFFTVGL
GINPCPTCKQGNGSRVVASVNNVTFVMPTVALLQAHFFGTKGVFTTDFPANPPFAFNYTG
TGPTNLATMNGTKVYRLRYNDTVQLVLQDTGIIAPENHPIHLHGFNFFLVGKGIGNFNPK
TDPKNFNLVDPVERNTVGVPAGGWVAIRFRADNPGVWFMHCHLEIHTTWGLKMAWLVDNG
KGPNESLLPPPKDLPKC

Transcript Sequence

Gene sequence data has not been registered.